Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT35945.1 | AKT38635.1 | CMC5_000570 | CMC5_027820 | Uncharacterized protein. | Uncharacterized protein. | 0.599 |
AKT37640.1 | AKT38635.1 | CMC5_017820 | CMC5_027820 | Amino acid ABC transporter permease. | Uncharacterized protein. | 0.630 |
AKT37640.1 | katE | CMC5_017820 | CMC5_017120 | Amino acid ABC transporter permease. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.611 |
AKT38635.1 | AKT35945.1 | CMC5_027820 | CMC5_000570 | Uncharacterized protein. | Uncharacterized protein. | 0.599 |
AKT38635.1 | AKT37640.1 | CMC5_027820 | CMC5_017820 | Uncharacterized protein. | Amino acid ABC transporter permease. | 0.630 |
AKT38635.1 | AKT38636.1 | CMC5_027820 | CMC5_027830 | Uncharacterized protein. | Uncharacterized protein. | 0.741 |
AKT38635.1 | AKT38637.1 | CMC5_027820 | CMC5_027840 | Uncharacterized protein. | Uncharacterized protein. | 0.494 |
AKT38635.1 | bfr | CMC5_027820 | CMC5_065520 | Uncharacterized protein. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.593 |
AKT38635.1 | csbD | CMC5_027820 | CMC5_029520 | Uncharacterized protein. | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | 0.400 |
AKT38635.1 | csbD-2 | CMC5_027820 | CMC5_072750 | Uncharacterized protein. | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | 0.400 |
AKT38635.1 | katE | CMC5_027820 | CMC5_017120 | Uncharacterized protein. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.684 |
AKT38636.1 | AKT38635.1 | CMC5_027830 | CMC5_027820 | Uncharacterized protein. | Uncharacterized protein. | 0.741 |
AKT38636.1 | AKT38637.1 | CMC5_027830 | CMC5_027840 | Uncharacterized protein. | Uncharacterized protein. | 0.513 |
AKT38637.1 | AKT38635.1 | CMC5_027840 | CMC5_027820 | Uncharacterized protein. | Uncharacterized protein. | 0.494 |
AKT38637.1 | AKT38636.1 | CMC5_027840 | CMC5_027830 | Uncharacterized protein. | Uncharacterized protein. | 0.513 |
bfr | AKT38635.1 | CMC5_065520 | CMC5_027820 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Uncharacterized protein. | 0.593 |
bfr | katE | CMC5_065520 | CMC5_017120 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.746 |
csbD | AKT38635.1 | CMC5_029520 | CMC5_027820 | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | Uncharacterized protein. | 0.400 |
csbD | katE | CMC5_029520 | CMC5_017120 | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.510 |
csbD-2 | AKT38635.1 | CMC5_072750 | CMC5_027820 | General stress protein CsbD; Belongs to the UPF0337 (CsbD) family. | Uncharacterized protein. | 0.400 |
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