Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT36616.1 | ureC | CMC5_007360 | CMC5_027900 | Uncharacterized protein. | Urease subunit alpha. | 0.534 |
alc | ureB | CMC5_071200 | CMC5_027890 | Allantoicase; Belongs to the allantoicase family. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.925 |
alc | ureC | CMC5_071200 | CMC5_027900 | Allantoicase; Belongs to the allantoicase family. | Urease subunit alpha. | 0.906 |
ureB | alc | CMC5_027890 | CMC5_071200 | Urease subunit beta; Belongs to the urease beta subunit family. | Allantoicase; Belongs to the allantoicase family. | 0.925 |
ureB | ureC | CMC5_027890 | CMC5_027900 | Urease subunit beta; Belongs to the urease beta subunit family. | Urease subunit alpha. | 0.999 |
ureB | ureD | CMC5_027890 | CMC5_027860 | Urease subunit beta; Belongs to the urease beta subunit family. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.993 |
ureB | ureF | CMC5_027890 | CMC5_027920 | Urease subunit beta; Belongs to the urease beta subunit family. | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.998 |
ureB | ureG | CMC5_027890 | CMC5_027930 | Urease subunit beta; Belongs to the urease beta subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.995 |
ureC | AKT36616.1 | CMC5_027900 | CMC5_007360 | Urease subunit alpha. | Uncharacterized protein. | 0.534 |
ureC | alc | CMC5_027900 | CMC5_071200 | Urease subunit alpha. | Allantoicase; Belongs to the allantoicase family. | 0.906 |
ureC | ureB | CMC5_027900 | CMC5_027890 | Urease subunit alpha. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.999 |
ureC | ureD | CMC5_027900 | CMC5_027860 | Urease subunit alpha. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.922 |
ureC | ureF | CMC5_027900 | CMC5_027920 | Urease subunit alpha. | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.994 |
ureC | ureG | CMC5_027900 | CMC5_027930 | Urease subunit alpha. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.996 |
ureD | ureB | CMC5_027860 | CMC5_027890 | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.993 |
ureD | ureC | CMC5_027860 | CMC5_027900 | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease subunit alpha. | 0.922 |
ureD | ureF | CMC5_027860 | CMC5_027920 | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.996 |
ureD | ureG | CMC5_027860 | CMC5_027930 | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.985 |
ureF | ureB | CMC5_027920 | CMC5_027890 | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.998 |
ureF | ureC | CMC5_027920 | CMC5_027900 | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | Urease subunit alpha. | 0.994 |
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