Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38658.1Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
AKT41036.1
Cyclase/dehydrase.
     0.920
tetR-17
TetR family transcriptional regulator.
  
    0.640
AKT36102.1
Uncharacterized protein.
   
    0.604
AKT35932.1
RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.570
phoU
PhoU family transcriptional regulator; Plays a role in the regulation of phosphate uptake.
   
    0.563
AKT38659.1
Uncharacterized protein.
       0.556
hemH
Uncharacterized protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
    0.499
AKT42332.1
Uncharacterized protein; Belongs to the peptidase S26 family.
   
    0.492
AKT43411.1
Uncharacterized protein; Belongs to the peptidase S26 family.
   
    0.492
AKT39402.1
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
    0.451
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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