STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38676.1ABC transporter ATP-binding protein. (301 aa)    
Predicted Functional Partners:
AKT38677.1
Uncharacterized protein.
  
 
 0.872
macB
ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   
0.803
AKT38678.1
Uncharacterized protein.
       0.664
AKT41962.1
Uncharacterized protein.
 
  
0.591
AKT39843.1
Membrane protein.
 
 0.586
AKT41943.1
ABC transporter permease.
 
 
 0.564
cysS-2
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
   
 0.557
AKT39748.1
ABC transporter permease.
 
 
 0.556
AKT37060.1
ABC transporter; Belongs to the ABC transporter superfamily.
 
    
0.553
AKT36729.1
ABC transporter.
  
 0.549
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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