STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38683.1Uncharacterized protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (147 aa)    
Predicted Functional Partners:
trxA-3
Thioredoxin.
  
 
 0.972
arsB
Arsenic resistance protein ArsB.
 
  
 0.958
AKT38133.1
Uncharacterized protein.
  
 
 0.847
AKT38685.1
Glyoxalase.
  
  
 0.830
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.692
AKT43342.1
Uncharacterized protein.
  
 
 0.692
phrB
Deoxyribodipyrimidine photolyase.
  
 
   0.649
AKT42479.1
Uncharacterized protein.
  
 
 0.645
arsR
ArsR family transcriptional regulator.
  
  
 0.628
ybeY
Uncharacterized protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.621
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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