Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38728.1Long-chain fatty acid--CoA ligase. (541 aa)    
Predicted Functional Partners:
tugA
Uncharacterized protein.
  
 0.936
cndA
Uncharacterized protein.
  
 0.881
ajuC
Polyketide synthase.
  
 0.881
ajuE
Polyketide synthase.
  
 0.881
AKT41249.1
Polyketide synthase.
 
 0.875
ajuF
Polyketide synthase.
  
 0.849
ajuG
Uncharacterized protein.
  
 0.849
ajuL
Uncharacterized protein.
  
 0.775
croI
Uncharacterized protein.
  
 0.756
AKT38854.1
Uncharacterized protein.
  
 0.715
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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