STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38774.1succinyl-CoA:3-ketoacid-CoA transferase. (220 aa)    
Predicted Functional Partners:
AKT38775.1
succinyl-CoA:3-ketoacid-CoA transferase.
 0.999
AKT37802.1
3-oxoadipate:succinyl-CoA transferase subunit A.
  
 
 0.967
AKT43971.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.950
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 
 0.943
atoB-6
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.934
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.927
atoB-4
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.927
atoB-5
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.927
paaH
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.919
paaH-2
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.919
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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