Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKT37695.1 | AKT38776.1 | CMC5_018370 | CMC5_029220 | Uncharacterized protein. | Uncharacterized protein. | 0.644 |
| AKT37695.1 | AKT41392.1 | CMC5_018370 | CMC5_055920 | Uncharacterized protein. | Helicase. | 0.413 |
| AKT37695.1 | dnaN | CMC5_018370 | CMC5_005410 | Uncharacterized protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.820 |
| AKT37695.1 | recA | CMC5_018370 | CMC5_027760 | Uncharacterized protein. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.407 |
| AKT37695.1 | recA-2 | CMC5_018370 | CMC5_033780 | Uncharacterized protein. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.407 |
| AKT37695.1 | recQ | CMC5_018370 | CMC5_061870 | Uncharacterized protein. | ATP-dependent DNA helicase RecQ. | 0.799 |
| AKT37695.1 | topA | CMC5_018370 | CMC5_031030 | Uncharacterized protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.460 |
| AKT38776.1 | AKT37695.1 | CMC5_029220 | CMC5_018370 | Uncharacterized protein. | Uncharacterized protein. | 0.644 |
| AKT38776.1 | AKT41392.1 | CMC5_029220 | CMC5_055920 | Uncharacterized protein. | Helicase. | 0.662 |
| AKT38776.1 | dnaN | CMC5_029220 | CMC5_005410 | Uncharacterized protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.970 |
| AKT38776.1 | mutL | CMC5_029220 | CMC5_004430 | Uncharacterized protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.644 |
| AKT38776.1 | polB | CMC5_029220 | CMC5_066840 | Uncharacterized protein. | DNA polymerase II. | 0.871 |
| AKT38776.1 | recA | CMC5_029220 | CMC5_027760 | Uncharacterized protein. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.801 |
| AKT38776.1 | recA-2 | CMC5_029220 | CMC5_033780 | Uncharacterized protein. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.803 |
| AKT38776.1 | recQ | CMC5_029220 | CMC5_061870 | Uncharacterized protein. | ATP-dependent DNA helicase RecQ. | 0.860 |
| AKT38776.1 | secA | CMC5_029220 | CMC5_000400 | Uncharacterized protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.762 |
| AKT38776.1 | topA | CMC5_029220 | CMC5_031030 | Uncharacterized protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.693 |
| AKT41392.1 | AKT37695.1 | CMC5_055920 | CMC5_018370 | Helicase. | Uncharacterized protein. | 0.413 |
| AKT41392.1 | AKT38776.1 | CMC5_055920 | CMC5_029220 | Helicase. | Uncharacterized protein. | 0.662 |
| AKT41392.1 | dnaN | CMC5_055920 | CMC5_005410 | Helicase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.807 |
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