STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38800.1Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
AKT38799.1
Uncharacterized protein.
  
 0.965
AKT39182.1
Uncharacterized protein.
 
  
 0.829
AKT39994.1
Uncharacterized protein.
  
 0.829
AKT38798.1
Uncharacterized protein.
       0.773
AKT38797.1
Uncharacterized protein.
       0.718
AKT41962.1
Uncharacterized protein.
  
  
 0.690
AKT38801.1
Uncharacterized protein.
       0.686
AKT37638.1
ABC transporter sodium permease.
  
  
 0.662
AKT37667.1
Nitroreductase.
  
  
 0.552
ndh-3
NADH dehydrogenase.
  
  
 0.552
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.