Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
csbDGeneral stress protein CsbD; Belongs to the UPF0337 (CsbD) family. (99 aa)    
Predicted Functional Partners:
AKT37868.1
Uncharacterized protein.
  
    0.670
AKT39673.1
Uncharacterized protein.
  
    0.660
ohr
Organic hydroperoxide resistance protein.
  
  
 0.626
AKT36574.1
Pyridoxamine 5-phosphate oxidase.
  
    0.579
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.549
AKT39858.1
Uncharacterized protein.
   
  
 0.531
AKT37768.1
Outer membrane polysaccharide exporter.
   
    0.491
AKT39872.1
Uncharacterized protein.
   
    0.491
AKT43211.1
Uncharacterized protein.
   
    0.491
AKT42624.1
Uncharacterized protein.
   
    0.454
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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