Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
croFUncharacterized protein. (267 aa)    
Predicted Functional Partners:
croE
3-hydroxy-3-methylglutaryl-ACP synthase.
  
 
 0.987
mvaB
hydroxymethylglutaryl-CoA lyase.
 
 0.982
paaG-7
enoyl-CoA hydratase.
  
  
 
0.927
AKT38930.1
acetyl-CoA carboxylase biotin carboxylase.
  
 0.926
paaG-6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
0.889
croI
Uncharacterized protein.
  
 0.869
croD
Polyketide synthase.
  
  
 0.847
croC
Polyketide synthase.
  
 0.838
croJ
Polyketide synthase.
  
 0.838
AKT38854.1
Uncharacterized protein.
  
 0.831
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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