Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
croKUncharacterized protein. (1536 aa)    
Predicted Functional Partners:
AKT42974.1
Polyketide synthase.
  
 0.996
cmdD
Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine.
 
 
0.995
AKT37645.1
Uncharacterized protein.
 
 
0.994
cndF
Amino acid adenylation domain-containing protein.
 
 
0.994
croI
Uncharacterized protein.
 
 
0.991
ajuH
Uncharacterized protein.
 
  
 0.991
AKT39491.1
Polyketide synthase.
 
0.990
mbtH
Antibiotic synthesis protein MbtH.
 
 
 0.988
AKT35905.1
Uncharacterized protein.
 
 0.986
AKT42975.1
Uncharacterized protein.
 
 
0.985
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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