Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38875.1Hydrolase. (288 aa)    
Predicted Functional Partners:
cndA
Uncharacterized protein.
  
 0.738
AKT36353.1
Alpha/beta hydrolase.
  
     0.626
AKT37847.1
Uncharacterized protein.
  
     0.611
AKT41941.1
Alpha/beta hydrolase fold protein.
  
     0.571
tugA
Uncharacterized protein.
  
 0.570
AKT38854.1
Uncharacterized protein.
  
 0.564
AKT41383.1
Hydrolase.
  
     0.541
ajuC
Polyketide synthase.
  
 0.524
ajuE
Polyketide synthase.
  
 0.524
AKT38876.1
Uncharacterized protein.
       0.514
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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