Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT38877.1 | aldA-4 | CMC5_030240 | CMC5_030260 | Uncharacterized protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.545 |
AKT38877.1 | aldA-5 | CMC5_030240 | CMC5_030270 | Uncharacterized protein. | Aldehyde dehydrogenase. | 0.543 |
AKT38877.1 | deoC | CMC5_030240 | CMC5_030250 | Uncharacterized protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.548 |
aldA-4 | AKT38877.1 | CMC5_030260 | CMC5_030240 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Uncharacterized protein. | 0.545 |
aldA-4 | aldA-5 | CMC5_030260 | CMC5_030270 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase. | 0.844 |
aldA-4 | deoC | CMC5_030260 | CMC5_030250 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.952 |
aldA-5 | AKT38877.1 | CMC5_030270 | CMC5_030240 | Aldehyde dehydrogenase. | Uncharacterized protein. | 0.543 |
aldA-5 | aldA-4 | CMC5_030270 | CMC5_030260 | Aldehyde dehydrogenase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.844 |
aldA-5 | deoC | CMC5_030270 | CMC5_030250 | Aldehyde dehydrogenase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.980 |
deoC | AKT38877.1 | CMC5_030250 | CMC5_030240 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | Uncharacterized protein. | 0.548 |
deoC | aldA-4 | CMC5_030250 | CMC5_030260 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.952 |
deoC | aldA-5 | CMC5_030250 | CMC5_030270 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | Aldehyde dehydrogenase. | 0.980 |