STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rsbV-7Anti-anti-sigma factor. (449 aa)    
Predicted Functional Partners:
AKT40420.1
Uncharacterized protein.
 
 
 0.884
AKT40823.1
Protein kinase.
 
 
 0.883
AKT40421.1
Uncharacterized protein.
 
 
 0.878
AKT36799.1
Histidine kinase.
 
 
 0.875
AKT37460.1
Diguanylate cyclase.
  
 
 0.875
AKT40822.1
Uncharacterized protein.
 
 
 0.853
AKT40419.1
Sulfate transporter.
 
     0.775
AKT40535.1
Uncharacterized protein.
 
 
 0.764
AKT36039.1
Uncharacterized protein.
 
 
 0.758
AKT43916.1
Two-component hybrid sensor and regulator.
  
 
 0.745
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.