Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38973.1Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
AKT38974.1
Peptide transporter.
 
     0.648
AKT37542.1
TonB-dependent receptor.
  
     0.644
AKT38172.1
Uncharacterized protein.
  
     0.627
AKT39438.1
TonB-dependent receptor.
  
     0.547
AKT42828.1
Uncharacterized protein.
  
     0.494
AKT42831.1
Methyltransferase type 12.
  
     0.448
AKT43384.1
Uncharacterized protein.
  
     0.442
AKT35940.1
Uncharacterized protein.
  
     0.435
AKT40340.1
Uncharacterized protein.
  
     0.429
AKT42357.1
Uncharacterized protein.
  
     0.424
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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