STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-7Chemotaxis protein CheY. (125 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.937
AKT36887.1
Uncharacterized protein.
 
 0.932
AKT36206.1
Chemotaxis protein A.
 
 0.931
cheY-14
Chemotaxis protein CheY.
  
0.919
cheY
Chemotaxis protein CheY.
  
  
 
0.913
AKT43045.1
Uncharacterized protein.
 
 
 0.856
AKT39301.1
Sensor histidine kinase.
 
 
 0.850
AKT42701.1
Uncharacterized protein.
 
 
 0.839
AKT38766.1
Uncharacterized protein.
 
 
 0.838
AKT42412.1
Uncharacterized protein.
 
 
 0.838
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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