STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39004.1Diguanylate cyclase. (315 aa)    
Predicted Functional Partners:
AKT39187.1
Uncharacterized protein.
 
  
 0.950
AKT41879.1
Phosphohydrolase.
 
 0.922
AKT36799.1
Histidine kinase.
 
 0.790
AKT42973.1
Uncharacterized protein.
 
 
 0.764
AKT36039.1
Uncharacterized protein.
 
 0.756
AKT43916.1
Two-component hybrid sensor and regulator.
 
 
 0.751
AKT42445.1
Uncharacterized protein.
    
 0.746
AKT37409.1
Transcriptional regulator.
 
  
 0.738
AKT40030.1
Serine/threonine protein kinase.
 
 
 0.729
AKT36127.1
Transcriptional regulator.
 
  
 0.721
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.