STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39027.1DNA repair ATPase. (1910 aa)    
Predicted Functional Partners:
AKT39028.1
Uncharacterized protein.
 
    0.954
AKT39029.1
Uncharacterized protein.
 
    0.858
AKT36872.1
Uncharacterized protein.
 
  
 0.718
AKT39391.1
Uncharacterized protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.611
AKT38903.1
Uncharacterized protein.
   
    0.546
AKT42664.1
Uncharacterized protein.
  
     0.480
AKT39109.1
Uncharacterized protein.
  
    0.465
AKT43268.1
Uncharacterized protein.
  
     0.453
AKT37597.1
Uncharacterized protein.
  
    0.441
AKT42663.1
Uncharacterized protein.
  
     0.402
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.