Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39051.1Uncharacterized protein. (1419 aa)    
Predicted Functional Partners:
AKT39052.1
Uncharacterized protein.
 
    
0.837
AKT36047.1
Uncharacterized protein.
 
  
 0.781
AKT37869.1
Uncharacterized protein.
 
   
 0.778
AKT42905.1
Uncharacterized protein.
 
     0.778
AKT37873.1
Uncharacterized protein.
  
     0.775
AKT40508.1
Uncharacterized protein.
  
     0.775
AKT37436.1
Uncharacterized protein.
  
     0.774
AKT41768.1
Uncharacterized protein.
  
     0.773
AKT38921.1
Uncharacterized protein.
  
     0.772
AKT44134.1
Uncharacterized protein.
  
     0.772
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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