STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39066.1NAD-dependent dehydratase. (344 aa)    
Predicted Functional Partners:
AKT39068.1
Nucleoside-diphosphate-sugar pyrophosphorylase.
 
 
 0.832
AKT39060.1
Glycosyltransferase.
 
    0.782
AKT39065.1
Uncharacterized protein.
       0.773
degT-3
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.760
ugd
UDP-glucose 6-dehydrogenase.
 
 0.589
cysM-2
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.553
AKT39064.1
Uncharacterized protein.
       0.553
AKT40809.1
Nucleotidyl transferase.
 
 
 0.542
rpsN
30S ribosomal protein S14.
   
  0.526
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.526
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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