Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT37427.1 | ftsH-2 | CMC5_015680 | CMC5_065350 | Uncharacterized protein. | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.527 |
AKT37427.1 | ftsW | CMC5_015680 | CMC5_065380 | Uncharacterized protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.495 |
AKT37427.1 | mrdB | CMC5_015680 | CMC5_038790 | Uncharacterized protein. | Cell wall shape-determining protein; Belongs to the SEDS family. | 0.495 |
AKT37427.1 | mreC | CMC5_015680 | CMC5_038760 | Uncharacterized protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.614 |
AKT37427.1 | pbp-2 | CMC5_015680 | CMC5_032290 | Uncharacterized protein. | Penicillin-binding protein. | 0.640 |
AKT39085.1 | nth | CMC5_032320 | CMC5_032300 | Uncharacterized protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.781 |
AKT39085.1 | pbp-2 | CMC5_032320 | CMC5_032290 | Uncharacterized protein. | Penicillin-binding protein. | 0.633 |
AKT39085.1 | ung-2 | CMC5_032320 | CMC5_032310 | Uncharacterized protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.783 |
ftsH-2 | AKT37427.1 | CMC5_065350 | CMC5_015680 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Uncharacterized protein. | 0.527 |
ftsH-2 | ftsW | CMC5_065350 | CMC5_065380 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Cell division protein FtsW; Belongs to the SEDS family. | 0.989 |
ftsH-2 | mrdB | CMC5_065350 | CMC5_038790 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Cell wall shape-determining protein; Belongs to the SEDS family. | 0.836 |
ftsH-2 | mreC | CMC5_065350 | CMC5_038760 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.518 |
ftsH-2 | murE | CMC5_065350 | CMC5_065410 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.937 |
ftsH-2 | pbp-2 | CMC5_065350 | CMC5_032290 | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Penicillin-binding protein. | 0.762 |
ftsW | AKT37427.1 | CMC5_065380 | CMC5_015680 | Cell division protein FtsW; Belongs to the SEDS family. | Uncharacterized protein. | 0.495 |
ftsW | ftsH-2 | CMC5_065380 | CMC5_065350 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.989 |
ftsW | mrdB | CMC5_065380 | CMC5_038790 | Cell division protein FtsW; Belongs to the SEDS family. | Cell wall shape-determining protein; Belongs to the SEDS family. | 0.455 |
ftsW | mreC | CMC5_065380 | CMC5_038760 | Cell division protein FtsW; Belongs to the SEDS family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.639 |
ftsW | mtgA | CMC5_065380 | CMC5_060700 | Cell division protein FtsW; Belongs to the SEDS family. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.639 |
ftsW | murE | CMC5_065380 | CMC5_065410 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.954 |
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