Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39117.1Uncharacterized protein. (746 aa)    
Predicted Functional Partners:
AKT38679.1
Uncharacterized protein.
  
     0.757
AKT40232.1
Uncharacterized protein.
  
     0.735
AKT36946.1
Uncharacterized protein.
  
     0.731
AKT41924.1
Uncharacterized protein.
  
     0.716
AKT42813.1
Uncharacterized protein.
  
     0.696
AKT43143.1
Uncharacterized protein.
  
   
 0.695
AKT36746.1
Uncharacterized protein.
  
     0.689
capB
Capsule biosynthesis protein CapB.
  
   
 0.683
AKT42745.1
Uncharacterized protein.
  
   
 0.682
AKT43197.1
Uncharacterized protein; Belongs to the sigma-70 factor family.
  
     0.681
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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