STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39152.1Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
AKT44134.1
Uncharacterized protein.
  
     0.533
AKT36047.1
Uncharacterized protein.
  
     0.529
AKT37436.1
Uncharacterized protein.
  
     0.527
AKT37753.1
Uncharacterized protein.
  
     0.527
AKT39153.1
Uncharacterized protein.
       0.511
AKT44147.1
Signal protein PDZ.
  
     0.506
AKT37479.1
Uncharacterized protein.
  
     0.495
cysC
Uncharacterized protein; Catalyzes the synthesis of activated sulfate.
       0.471
AKT37276.1
Uncharacterized protein.
  
     0.451
ddl-2
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
     0.446
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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