Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39187.1Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
AKT36039.1
Uncharacterized protein.
 
0.986
AKT36799.1
Histidine kinase.
 
0.986
AKT40762.1
Sensory hisitidine kinase.
 
 
 0.977
AKT37460.1
Diguanylate cyclase.
  
 
 0.974
AKT41419.1
Uncharacterized protein.
 
 0.969
AKT38785.1
Uncharacterized protein.
 
 0.962
AKT43361.1
Sensor histidine kinase.
   
 0.959
AKT36128.1
Uncharacterized protein.
 
0.956
AKT41966.1
Uncharacterized protein.
 
 0.956
AKT35993.1
Diguanylate cyclase.
 
  
 0.949
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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