Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39193.1Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
AKT37022.1
Uncharacterized protein.
  
     0.739
AKT40741.1
Rhs family carbohydrate-binding protein.
  
     0.723
AKT37238.1
Uncharacterized protein.
  
     0.720
AKT42727.1
Type IV secretion protein Rhs.
  
     0.647
AKT40798.1
Uncharacterized protein.
  
     0.646
AKT41505.1
Type IV secretion protein Rhs.
  
     0.646
AKT40645.1
Type IV secretion protein Rhs.
  
     0.643
AKT38795.1
Type IV secretion protein Rhs.
  
     0.642
AKT43306.1
Type IV secretion protein Rhs.
  
     0.627
AKT39192.1
Uncharacterized protein.
       0.620
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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