Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39210.1Lipid transfer protein M30-like protein. (278 aa)    
Predicted Functional Partners:
AKT39209.1
ATPase.
       0.784
AKT36799.1
Histidine kinase.
    
 
 0.760
AKT36039.1
Uncharacterized protein.
    
 
 0.751
AKT39211.1
Uncharacterized protein.
       0.655
AKT40535.1
Uncharacterized protein.
   
 
 0.623
AKT41419.1
Uncharacterized protein.
   
 
 0.577
AKT38785.1
Uncharacterized protein.
    
 
 0.575
AKT39028.1
Uncharacterized protein.
  
  
 0.523
AKT39009.1
Uncharacterized protein.
  
  
 0.510
AKT39010.1
Band 7 protein.
  
  
 0.510
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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