STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39216.1Uncharacterized protein. (752 aa)    
Predicted Functional Partners:
pilC
Pilus biosynthesis protein PilC.
 
  
 0.825
AKT36225.1
Uncharacterized protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.815
gspF
General secretion pathway protein GspF.
 
  
 0.809
pilM
Pilus assembly protein PilM.
 
   
 0.762
AKT39790.1
Uncharacterized protein.
 
  
 0.752
AKT37460.1
Diguanylate cyclase.
     
 0.464
AKT39215.1
Uncharacterized protein.
       0.443
AKT39217.1
Uncharacterized protein.
       0.437
AKT36281.1
Competence protein.
     
 0.436
pilQ
Pilus assembly protein PilQ.
 
   
 0.429
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.