Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKT36281.1 | holA | CMC5_003950 | CMC5_033880 | Competence protein. | DNA polymerase III subunit delta. | 0.626 |
| AKT39239.1 | holA | CMC5_033870 | CMC5_033880 | Uncharacterized protein. | DNA polymerase III subunit delta. | 0.564 |
| AKT39286.1 | AKT42274.1 | CMC5_034340 | CMC5_064970 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
| AKT39286.1 | dnaE | CMC5_034340 | CMC5_049860 | Uncharacterized protein. | DNA polymerase III subunit alpha. | 0.978 |
| AKT39286.1 | dnaE2 | CMC5_034340 | CMC5_064550 | Uncharacterized protein. | DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.755 |
| AKT39286.1 | dnaN | CMC5_034340 | CMC5_005410 | Uncharacterized protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.990 |
| AKT39286.1 | dnaQ | CMC5_034340 | CMC5_081930 | Uncharacterized protein. | DNA polymerase III subunit epsilon. | 0.975 |
| AKT39286.1 | dnaX | CMC5_034340 | CMC5_084410 | Uncharacterized protein. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.927 |
| AKT39286.1 | holA | CMC5_034340 | CMC5_033880 | Uncharacterized protein. | DNA polymerase III subunit delta. | 0.988 |
| AKT42274.1 | AKT39286.1 | CMC5_064970 | CMC5_034340 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
| AKT42274.1 | dnaE | CMC5_064970 | CMC5_049860 | Uncharacterized protein. | DNA polymerase III subunit alpha. | 0.973 |
| AKT42274.1 | dnaE2 | CMC5_064970 | CMC5_064550 | Uncharacterized protein. | DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.742 |
| AKT42274.1 | dnaN | CMC5_064970 | CMC5_005410 | Uncharacterized protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.987 |
| AKT42274.1 | dnaQ | CMC5_064970 | CMC5_081930 | Uncharacterized protein. | DNA polymerase III subunit epsilon. | 0.926 |
| AKT42274.1 | dnaX | CMC5_064970 | CMC5_084410 | Uncharacterized protein. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.975 |
| AKT42274.1 | holA | CMC5_064970 | CMC5_033880 | Uncharacterized protein. | DNA polymerase III subunit delta. | 0.963 |
| AKT44022.1 | holA | CMC5_082600 | CMC5_033880 | Nif3-like dinuclear metal center hexameric protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | DNA polymerase III subunit delta. | 0.620 |
| dnaE | AKT39286.1 | CMC5_049860 | CMC5_034340 | DNA polymerase III subunit alpha. | Uncharacterized protein. | 0.978 |
| dnaE | AKT42274.1 | CMC5_049860 | CMC5_064970 | DNA polymerase III subunit alpha. | Uncharacterized protein. | 0.973 |
| dnaE | dnaN | CMC5_049860 | CMC5_005410 | DNA polymerase III subunit alpha. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
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