Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKT39265.150S ribosomal protein L11 methyltransferase. (240 aa)    
Predicted Functional Partners:
paaY
Phenylacetic acid degradation protein PaaY.
       0.615
thiS
Thiamine biosynthesis protein ThiS.
       0.615
miaB
Dimethylallyladenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.591
AKT41972.1
N-acetyltransferase GCN5.
  
     0.556
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.464
AKT39261.1
Long-chain fatty acid--CoA ligase.
  
    0.445
thrB
Serine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.427
AKT39266.1
Uncharacterized protein.
       0.422
AKT42428.1
Uncharacterized protein.
  
     0.419
bolA
BolA family transcriptional regulator; Belongs to the BolA/IbaG family.
  
    0.413
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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