STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39269.1Serine/threonine dehydratase. (330 aa)    
Predicted Functional Partners:
thrC
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
 
 0.754
ilvH
Acetolactate synthase; Belongs to the TPP enzyme family.
  
 0.697
AKT36231.1
3-isopropylmalate dehydratase.
 
  
 0.687
AKT43632.1
Glutamate synthase.
  
 
 0.623
leuB
3-isopropylmalate dehydrogenase.
 
 
 0.576
AKT39268.1
Uncharacterized protein.
       0.521
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.521
AKT42219.1
Uncharacterized protein; Belongs to the TPP enzyme family.
 
 
 0.495
ilvE-2
Branched-chain amino acid aminotransferase.
  
 
 0.488
AKT42223.1
Uncharacterized protein.
     
 0.450
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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