STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39289.1phenylacetate--CoA ligase. (504 aa)    
Predicted Functional Partners:
AKT44083.1
Oxidoreductase FAD-binding domain-containing protein.
  
 
 0.922
AKT39618.1
Amidase; Belongs to the amidase family.
    
  0.903
AKT39288.1
Epimerase.
       0.779
AKT40295.1
Transcriptional regulator.
  
     0.610
AKT42640.1
Uncharacterized protein.
  
     0.557
hutH
Histidine ammonia-lyase.
      0.495
AKT41863.1
Uncharacterized protein.
  
     0.492
porD-5
Ferredoxin.
  
     0.481
AKT39287.1
Uncharacterized protein.
       0.468
AKT38564.1
Uncharacterized protein.
  
     0.452
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.