STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39352.1Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
AKT38555.1
Uncharacterized protein.
     
  0.900
AKT39353.1
NADH oxidase.
 
     0.811
AKT39357.1
Endoribonuclease L-PSP.
       0.784
fabG
3-ketoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.774
fadE-7
acyl-CoA dehydrogenase.
       0.773
paaG-9
enoyl-CoA hydratase.
       0.773
marR
MarR family transcriptional regulator.
       0.773
nfrB
Glycosyl transferase family 2.
  
  
 0.632
AKT37315.1
Uncharacterized protein.
  
  
 0.632
nfrB-3
Glycosyl transferase family 2.
  
  
 0.632
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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