STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39357.1Endoribonuclease L-PSP. (141 aa)    
Predicted Functional Partners:
paaG-9
enoyl-CoA hydratase.
 
     0.901
marR
MarR family transcriptional regulator.
 
     0.892
fadE-7
acyl-CoA dehydrogenase.
 
 
   0.875
fabG
3-ketoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.845
AKT39353.1
NADH oxidase.
 
  
 0.822
AKT39514.1
salicylyl-CoA 5-hydroxylase.
 
  
 0.798
AKT39352.1
Uncharacterized protein.
       0.784
AKT44198.1
Deaminase.
  
     0.712
AKT38996.1
Thioesterase.
 
     0.625
AKT39036.1
Uncharacterized protein.
  
     0.559
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (30%) [HD]