Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39383.1Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
AKT39384.1
Uncharacterized protein.
  
  
 0.932
AKT39381.1
Uncharacterized protein.
  
  
 0.917
AKT39385.1
Uncharacterized protein.
  
  
 0.873
AKT39382.1
Uncharacterized protein.
       0.773
AKT39380.1
Uncharacterized protein.
       0.753
AKT41051.1
Fimbrial protein pilA.
  
  
 0.731
AKT37144.1
Uncharacterized protein.
  
  
 0.715
AKT44011.1
Uncharacterized protein.
  
  
 0.687
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
       0.507
AKT39386.1
Uncharacterized protein.
       0.488
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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