Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39397.1Modulator protein. (460 aa)    
Predicted Functional Partners:
tldD-2
Protease TldD.
 
 
0.759
tldD
Protease TldD.
 
 
0.758
AKT39396.1
Uncharacterized protein.
       0.746
AKT39398.1
Uncharacterized protein.
       0.550
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase.
 
    0.537
AKT39399.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase.
     
 0.436
AKT39400.1
Uncharacterized protein; Belongs to the LarC family.
       0.405
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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