Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKT39400.1Uncharacterized protein; Belongs to the LarC family. (490 aa)    
Predicted Functional Partners:
AKT39399.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase.
 
  
 0.986
AKT43116.1
Uncharacterized protein.
  
 0.986
AKT36503.1
Uncharacterized protein.
 
  
 0.727
AKT39398.1
Uncharacterized protein.
       0.550
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
 
      0.513
AKT38002.1
Tat pathway signal protein.
 
     0.482
ndh-6
NADH dehydrogenase.
   
    0.447
AKT39397.1
Modulator protein.
       0.405
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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