STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I deoxyribonuclease HsdR. (496 aa)    
Predicted Functional Partners:
hsdR-3
Type I deoxyribonuclease HsdR.
  
  
 
0.916
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
nmrA-4
NmrA family transcriptional regulator.
     
  0.900
AKT40975.1
NAD(P)H quinone oxidoreductase.
     
  0.900
nmrA-6
NmrA family transcriptional regulator.
     
  0.900
AKT39420.1
Uncharacterized protein.
 
     0.899
AKT39418.1
Ligand-gated channel protein.
 
     0.815
AKT39702.1
Peptidase M75.
 
     0.702
AKT36822.1
Uncharacterized protein.
  
     0.548
AKT41898.1
Uncharacterized protein.
  
     0.547
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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