Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39477.1Ferredoxin reductase. (483 aa)    
Predicted Functional Partners:
porD-4
Ferredoxin.
     
 0.796
AKT36891.1
Uncharacterized protein.
   
 
 0.743
AKT43829.1
Uncharacterized protein.
   
 
 0.743
AKT39476.1
Cytochrome P450.
 
   
 0.723
AKT42557.1
Assimilatory nitrite reductase small subunit.
  
 
 0.707
AKT43540.1
Oxidoreductase.
  
 
 0.668
AKT40324.1
Oxidoreductase.
 
  
 0.601
AKT39479.1
Uncharacterized protein.
  
    0.566
AKT39480.1
Uncharacterized protein.
       0.562
AKT36193.1
Glycine oxidase.
   
 
 0.549
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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