STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39514.1salicylyl-CoA 5-hydroxylase. (777 aa)    
Predicted Functional Partners:
AKT38426.1
4-hydroxybenzoate--CoA ligase.
  
 0.888
AKT39357.1
Endoribonuclease L-PSP.
 
  
 0.798
AKT43286.1
4-hydroxybenzoate--CoA ligase.
  
 0.780
marR
MarR family transcriptional regulator.
 
  
 0.721
AKT38996.1
Thioesterase.
 
  
 0.717
AKT39513.1
Transcriptional regulator.
  
  
 0.658
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.647
tugA
Uncharacterized protein.
  
 
 0.645
paaG-9
enoyl-CoA hydratase.
 
 
 0.634
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.633
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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