Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39615.1Uncharacterized protein. (745 aa)    
Predicted Functional Partners:
AKT39616.1
Uncharacterized protein.
       0.773
AKT41825.1
Uncharacterized protein.
  
   
 0.664
AKT37797.1
Uncharacterized protein.
 
     0.618
AKT39617.1
Uncharacterized protein.
       0.598
AKT38099.1
Uncharacterized protein.
  
 
 0.521
AKT39614.1
Uncharacterized protein.
       0.518
maeB
Malic enzyme.
 
    0.485
AKT39613.1
Uncharacterized protein.
       0.468
AKT41903.1
FeS-binding protein.
  
     0.439
AKT38942.1
Peptidase M14.
  
     0.420
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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