Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKT37282.1 | cafA | CMC5_014130 | CMC5_076320 | RNA helicase; Belongs to the DEAD box helicase family. | Ribonuclease G. | 0.660 |
| AKT37282.1 | infB | CMC5_014130 | CMC5_028940 | RNA helicase; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.452 |
| AKT37282.1 | pnp | CMC5_014130 | CMC5_037940 | RNA helicase; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.900 |
| AKT37282.1 | rho | CMC5_014130 | CMC5_007680 | RNA helicase; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.453 |
| AKT37282.1 | rplC | CMC5_014130 | CMC5_034920 | RNA helicase; Belongs to the DEAD box helicase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.858 |
| AKT37282.1 | rpoA | CMC5_014130 | CMC5_007640 | RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.540 |
| AKT37282.1 | rpoB | CMC5_014130 | CMC5_015480 | RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.542 |
| AKT40416.1 | AKT42124.1 | CMC5_045690 | CMC5_063470 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.922 |
| AKT40416.1 | cafA | CMC5_045690 | CMC5_076320 | Uncharacterized protein. | Ribonuclease G. | 0.660 |
| AKT40416.1 | infB | CMC5_045690 | CMC5_028940 | Uncharacterized protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.452 |
| AKT40416.1 | pnp | CMC5_045690 | CMC5_037940 | Uncharacterized protein. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.883 |
| AKT40416.1 | rho | CMC5_045690 | CMC5_007680 | Uncharacterized protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.453 |
| AKT40416.1 | rplC | CMC5_045690 | CMC5_034920 | Uncharacterized protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.858 |
| AKT40416.1 | rpoA | CMC5_045690 | CMC5_007640 | Uncharacterized protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.540 |
| AKT40416.1 | rpoB | CMC5_045690 | CMC5_015480 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.542 |
| AKT42124.1 | AKT40416.1 | CMC5_063470 | CMC5_045690 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.922 |
| AKT42124.1 | cafA | CMC5_063470 | CMC5_076320 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Ribonuclease G. | 0.660 |
| AKT42124.1 | infB | CMC5_063470 | CMC5_028940 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.452 |
| AKT42124.1 | pnp | CMC5_063470 | CMC5_037940 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.883 |
| AKT42124.1 | rho | CMC5_063470 | CMC5_007680 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.453 |
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