STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39673.1Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
AKT42123.1
Transcriptional antiterminator.
   
  
 0.692
csbD
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
  
  
 0.659
csbD-2
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
  
  
 0.659
AKT43639.1
MFS transporter.
  
   
 0.651
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.606
AKT42624.1
Uncharacterized protein.
  
  
 0.550
AKT38252.1
Uncharacterized protein.
  
     0.526
AKT38262.1
Uncharacterized protein.
  
     0.489
AKT36673.1
Uncharacterized protein.
 
  
 0.483
AKT41457.1
Polyketide cyclase.
  
     0.481
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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