STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdR-2Type I deoxyribonuclease HsdR. (508 aa)    
Predicted Functional Partners:
AKT39702.1
Peptidase M75.
 
     0.845
AKT39700.1
Iron-regulated protein.
 
     0.611
AKT36822.1
Uncharacterized protein.
  
     0.576
AKT39701.1
Thiol oxidoreductase.
 
     0.564
AKT41898.1
Uncharacterized protein.
  
     0.499
AKT37048.1
Uncharacterized protein.
  
     0.491
AKT43209.1
Thrombospondin-like alanine-rich exported protein.
  
    0.476
AKT36557.1
Porin.
  
    0.472
ompA-4
OmpA-like domain-containing protein.
  
    0.455
AKT40347.1
Porin.
  
    0.448
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.