Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT40944.1 | AKT43632.1 | CMC5_051010 | CMC5_078670 | Oxidoreductase. | Glutamate synthase. | 0.998 |
AKT40944.1 | carA | CMC5_051010 | CMC5_038630 | Oxidoreductase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.919 |
AKT40944.1 | carB | CMC5_051010 | CMC5_038620 | Oxidoreductase. | Carbamoyl phosphate synthase large subunit. | 0.957 |
AKT40944.1 | purF | CMC5_051010 | CMC5_050510 | Oxidoreductase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.485 |
AKT40944.1 | pyrB | CMC5_051010 | CMC5_041100 | Oxidoreductase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.949 |
AKT40944.1 | pyrC | CMC5_051010 | CMC5_052060 | Oxidoreductase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.839 |
AKT43632.1 | AKT40944.1 | CMC5_078670 | CMC5_051010 | Glutamate synthase. | Oxidoreductase. | 0.998 |
AKT43632.1 | arcB | CMC5_078670 | CMC5_048450 | Glutamate synthase. | Ornithine carbamoyltransferase. | 0.584 |
AKT43632.1 | argG | CMC5_078670 | CMC5_004340 | Glutamate synthase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.592 |
AKT43632.1 | argG-2 | CMC5_078670 | CMC5_043060 | Glutamate synthase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.592 |
AKT43632.1 | carA | CMC5_078670 | CMC5_038630 | Glutamate synthase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.941 |
AKT43632.1 | carB | CMC5_078670 | CMC5_038620 | Glutamate synthase. | Carbamoyl phosphate synthase large subunit. | 0.974 |
AKT43632.1 | glmS | CMC5_078670 | CMC5_012180 | Glutamate synthase. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.963 |
AKT43632.1 | purF | CMC5_078670 | CMC5_050510 | Glutamate synthase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.957 |
arcB | AKT43632.1 | CMC5_048450 | CMC5_078670 | Ornithine carbamoyltransferase. | Glutamate synthase. | 0.584 |
arcB | argG | CMC5_048450 | CMC5_004340 | Ornithine carbamoyltransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.984 |
arcB | argG-2 | CMC5_048450 | CMC5_043060 | Ornithine carbamoyltransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.981 |
arcB | carA | CMC5_048450 | CMC5_038630 | Ornithine carbamoyltransferase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.915 |
arcB | carB | CMC5_048450 | CMC5_038620 | Ornithine carbamoyltransferase. | Carbamoyl phosphate synthase large subunit. | 0.959 |
arcB | pyrB | CMC5_048450 | CMC5_041100 | Ornithine carbamoyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.868 |
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