STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCRod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (284 aa)    
Predicted Functional Partners:
mreB
Rod shape-determining protein MreB.
 
 
 0.992
AKT39728.1
Uncharacterized protein.
  
 
 0.980
mrdA
Penicillin-binding protein 2.
 
 
 0.969
mrdB
Cell wall shape-determining protein; Belongs to the SEDS family.
 
  
 0.961
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.829
AKT42319.1
Peptidoglycan glycosyltransferase.
 
 
 0.705
AKT36620.1
Uncharacterized protein.
 
 
 0.691
AKT43208.1
Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.667
glnS-2
glutaminyl-tRNA synthetase.
  
    0.663
cmk
Cytidylate kinase.
  
  
 0.660
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.