STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39749.1ABC transporter. (346 aa)    
Predicted Functional Partners:
AKT39748.1
ABC transporter permease.
 
 
 0.971
AKT39747.1
Uncharacterized protein.
 
  
 0.958
AKT39843.1
Membrane protein.
 
 0.881
AKT41943.1
ABC transporter permease.
 
 
 0.877
AKT39746.1
Uncharacterized protein.
       0.805
AKT39745.1
Uncharacterized protein.
       0.642
AKT39842.1
ABC transporter.
  
 0.603
AKT41962.1
Uncharacterized protein.
 
  
0.590
AKT41944.1
Uncharacterized protein.
 
  
 0.563
AKT36270.1
ABC transporter ATP-binding protein.
  
     0.528
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.