STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39814.1Membrane protein. (876 aa)    
Predicted Functional Partners:
comL
Competence protein ComL.
 
 
 0.945
AKT40439.1
Uncharacterized protein.
 
 
 0.868
AKT39883.1
Uncharacterized protein.
 
  
 0.827
AKT41977.1
Outer membrane protein.
 
  
 0.824
AKT42338.1
Uncharacterized protein.
 
   
 0.769
AKT38037.1
ABC transporter permease.
 
   
 0.766
lnt-2
Uncharacterized protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
 
   
 0.753
AKT36369.1
Peptidase M50.
 
  
 0.740
AKT43508.1
Transport protein, tolQ.
  
     0.738
exbD-4
Biopolymer transporter ExbD.
  
     0.736
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.