STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39832.1Uncharacterized protein. (331 aa)    
Predicted Functional Partners:
AKT40053.1
Uncharacterized protein.
  
  
 
0.905
acpP-6
Acyl carrier protein.
 
   
 0.784
AKT39831.1
4Fe-4S ferredoxin.
       0.773
AKT37101.1
Uncharacterized protein.
  
     0.722
AKT37230.1
Uncharacterized protein.
  
     0.722
AKT38389.1
Electron-transferring-flavoprotein dehydrogenase.
  
     0.693
trmD
tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.678
AKT39830.1
Uncharacterized protein.
       0.678
AKT41223.1
Tryptophan halogenase.
  
     0.653
AKT42099.1
Oxidoreductase.
  
     0.641
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.