Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKT39844.1Multidrug ABC transporter ATPase. (379 aa)    
Predicted Functional Partners:
AKT39843.1
Membrane protein.
 
 0.967
AKT39842.1
ABC transporter.
 
  
 0.937
AKT41943.1
ABC transporter permease.
 
 
 0.857
AKT39748.1
ABC transporter permease.
 
 
 0.854
AKT39747.1
Uncharacterized protein.
 
  
 0.792
AKT39841.1
Uncharacterized protein.
       0.773
AKT41962.1
Uncharacterized protein.
  
  
 0.599
AKT39845.1
MFS transporter.
     
 0.506
AKT36270.1
ABC transporter ATP-binding protein.
  
     0.482
AKT41944.1
Uncharacterized protein.
 
  
 0.450
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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